Objects ======= With pyGeno you can manipulate familiar object in intuituive way. All the following classes except SNP inherit from pyGenoObjectWrapper and have therefor access to functions sur as get(), count(), ensureIndex()... Base classes ------------- Base classes are abstract and are not meant to be instanciated, they nonetheless implement most of the functions that classes such as Genome possess. .. automodule:: pyGeno.pyGenoObjectBases :members: Genome ------- .. automodule:: pyGeno.Genome :members: Chromosome ---------- .. automodule:: pyGeno.Chromosome :members: Gene ---- .. automodule:: pyGeno.Gene :members: Transcript ---------- .. automodule:: pyGeno.Transcript :members: Exon ---- .. automodule:: pyGeno.Exon :members: Protein ------- .. automodule:: pyGeno.Protein :members: SNP --- .. automodule:: pyGeno.SNP :members: